Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841532.1_cds_XP_016508006.1_21074
CDS Infomation

[gene=LOC107825643] [db_xref=GeneID:107825643] [protein=translocase of chloroplast 90, chloroplastic-like] [protein_id=XP_016508006.1] [location=complement(join(16046..18309,21366..21492))] [gbkey=CDS]
Sequence

ATGATGAGCTTGAAGGACTGGGTCCTGTCACAGTTGATATCCAAGTCAGTAGCCTCATCA
AGACCACTTTTAGCATCGGATAGCTTTTTATCTGAGGAACATCCTGATCAAGAGTTTGAT
CACCCAGCTCACACTGCTGATCTGGTTACAACAACAGCATTAGCCAATACAATCCAATCT
TCCAATGATAATCAGCAGAATACAAATCATTTCCATTCACAGCAACGGATAGTGGAGGAG
TCTTTTCAGTCAGATTGTAGTGTCGATGAGAAGCCTAGTCCAGTGGTAAAGATTGAAGCC
CTCCAGATTAAGTTCTTGCGGCTTCTTAAACGTTTTGGCCTGTCCGAGGACAACCTTCTG
GTATCAAAGGTCTTATACCGGATCCAGCTGGCATCACTGATACGGGCAAGAGAATCAGAT
TTGAAAAGGGCAAATCTTAAAATTGAGAAAGCACGTGTAATAGCAGCGGAACAAGAAGCT
GCTGGCCGACCACAATTGGATTTCTCATTTAAGATCCTTGTACTGGGTAGAACTGGAGTA
GGCAAGAGTTCAACCATAAATTCCATTTTTGACCAATCAAGAGCAAAAACTAACGCGTTC
AAGCCTGCTACTGACCGTATTCAAGAGATTGTGGGAACAGTAAATGGCATCAGAGTATCG
TTTATTGACACTCCTGGTTTATTGTCTCCCTCACTGGGTAATGTCAGGAAAAACAAGAAG
ATTTTGCGTTCTGTGAAACGATTTTTAAGGAAATCTAAACCTGACATGGTACTGTATTTT
GAGCGCCTGGATTTGATCAACACGGGCTATAGTGATTTCCCCTTGTTGAAGCTTATAACA
GAAGTCTTTGGTCCTGCAATTTGGTTTAATACCATCCTTGTCATGACTCATTCTTCCTTC
AATCTTCCCGAAGGGATAAATGGATATCCTGTTAACTATGAATCTTTCGTCACCACCTGC
ACAGATCTGGTGCAACATTATATTCACCAGGCAGTCTCTGATACGAAGCTTGAAAATCCT
GTAGTTCTGGTGGAGAATGGTCCCAATTGCAAAACCAATAATGCCGGAGAGAAAATTCTC
CCTAATGGGCAGGCGTGGAAGTCCCACTTAATGTTATTGTGCATTTGCACCAAAGTTCTA
AGTGATGTTAATACCCTATTGGACTTTAAAGACAGCCTAAAGGTGGGACCATCAAATGTA
GGACGATTGCCTTCTCTTCCACATCTTCTCTCGTCCTTTCTAAAGCATCATGCTCAGGTA
AGGCATAACGGAGCTGAGAATGAAATTGATGAGGTTCCTCTTTTAGACTCGGATGATGAA
GATGAATATGATCAATTACCTCCTATTCGGATACTGACCAAGTCTCAGTTTGAGAGGTTG
AGTGGTTCCCAAAAGAAGGATTATCTTGACGAATTAGACTACCGGGAAATCCTCTATTTG
AAAAAACAACTGATAGAAGAAGCTCGTAGGCGAAGAGAAAAGAGAGTTTCTTCCAGTGAG
AGTAAAGCCCCGGATGACGAGTCCGATAAACAAGAAGAGGGCTCTCCAGAGCCCGTTCTG
TTGCCAGATATGGCTATTCCGCCAAGCTTCGATTCAGATTGCCCTGTGCATAGATATAGG
TGTCTCATTACCAGCGAACAGTGGCTTGCACGACCAGTCCTTGATCCCAATGGATGGGAC
CATGATGTGAGCTTTGATGGCATTAACCTGGAGAGCAGTGCAGAAATAAGAAAAAACGTC
GTTGCCTCAGTCAATGGACAAATGAGCAAGGACAAACAAGACTTCAGTATTCAATCTGAG
TTTGCTGCAGCTTTCACCAATCCAGGTGGGCCTGCTTATGCGGTAGGTCTTGATATTCAA
TCTGCCAACAAGGAGCTGATCTGCACTATTCACAGTAGTGCAAAGGTAAGAAACTTAAGA
AATAATGTCACTGAATGCGGTATTTCTGTAATACCATTTGGGGATAAGTATTTTCTTGGT
ACCAAGTGTGAAGATAATTTTTCAATCGGAAAGAGACTGAAGTTTACTGTGAATGCTGGT
CGGATGGGGGGTGCTGGGCAAGCGGCTTATGGCGGAAGCTTTGGAGCTACTTTAAGAGGA
AAAGATTACCCAGTGAGAAATGAAAGTCTGAGTCTCTCGATGACAGTTCTCTCTCTTAAC
AAAGATACAGTGTTGAGCGGAAACTTGCAAACTGACTTCAGAGTGAGCCGAGGTACAAAC
ATGTCAGTTAGCGCAAACCTCAATAACCGGAATATGGGTCAAGTTTCCATCAAGACAAGC
AGCTCCGAGTACATGGAAGTAGCTTTTATTGCACTTTTCTCGATCGTCAGGGCCCTATTT
CGCAGAAAGAGAAATGACCAACTTGTTGGAGACTCCCTGGAAGCGGGATGA

Peptide Sequence

PEP ID

XP_016508006.1
PEP Infomation

PREDICTED: translocase of chloroplast 90, chloroplastic-like [Nicotiana tabacum]
Sequence

MMSLKDWVLSQLISKSVASSRPLLASDSFLSEEHPDQEFDHPAHTADLVTTTALANTIQS
SNDNQQNTNHFHSQQRIVEESFQSDCSVDEKPSPVVKIEALQIKFLRLLKRFGLSEDNLL
VSKVLYRIQLASLIRARESDLKRANLKIEKARVIAAEQEAAGRPQLDFSFKILVLGRTGV
GKSSTINSIFDQSRAKTNAFKPATDRIQEIVGTVNGIRVSFIDTPGLLSPSLGNVRKNKK
ILRSVKRFLRKSKPDMVLYFERLDLINTGYSDFPLLKLITEVFGPAIWFNTILVMTHSSF
NLPEGINGYPVNYESFVTTCTDLVQHYIHQAVSDTKLENPVVLVENGPNCKTNNAGEKIL
PNGQAWKSHLMLLCICTKVLSDVNTLLDFKDSLKVGPSNVGRLPSLPHLLSSFLKHHAQV
RHNGAENEIDEVPLLDSDDEDEYDQLPPIRILTKSQFERLSGSQKKDYLDELDYREILYL
KKQLIEEARRRREKRVSSSESKAPDDESDKQEEGSPEPVLLPDMAIPPSFDSDCPVHRYR
CLITSEQWLARPVLDPNGWDHDVSFDGINLESSAEIRKNVVASVNGQMSKDKQDFSIQSE
FAAAFTNPGGPAYAVGLDIQSANKELICTIHSSAKVRNLRNNVTECGISVIPFGDKYFLG
TKCEDNFSIGKRLKFTVNAGRMGGAGQAAYGGSFGATLRGKDYPVRNESLSLSMTVLSLN
KDTVLSGNLQTDFRVSRGTNMSVSANLNNRNMGQVSIKTSSSEYMEVAFIALFSIVRALF
RRKRNDQLVGDSLEAG

Transcript Sequence

Gene sequence data has not been registered.